PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0032s0007.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family C2H2
Protein Properties Length: 912aa    MW: 100289 Da    PI: 9.9527
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0032s0007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157e-05867888223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                          +C+ Cg++F  +++Lk+H+r  H
  Mapoly0032s0007.1.p 867 ECGQCGRTF-KPDSLKVHMRGcH 888
                          5********.**********955 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF061361.1E-4717253IPR010369Protein of unknown function DUF966
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005886Cellular Componentplasma membrane
Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    Send to blast
MVLVGQGMEP EEAFTKVQVV YYLSRGGQLQ QPHLIDVPVS THSNGLYLRD VKRRLTSIRG  60
KGMGDSFSWS CKRNYKNNFI WQDLADDDKI LPLSDGELVL KGSELYTGFQ EKAEFMDGQF  120
DPENASQLPN KIKKLASKKF DFEAVKRSLD MESDKLQEQS DLAAALSLSL QLMSDPHMKR  180
FSKDKSMDLN QQVMNSLSQA KSNAAEECML DHSVTDISSE TLHSEESTVQ KFSFNETIRE  240
RSKSTASASS SGTDREHSYG PPRKTESMGR ERSLPRDLPR SREVSRELPP QVPREAPREK  300
SREMSRELPR EAPRELQLPR EAPRELPREV PRETSRELPR EAPREISREL PREGPREVAR  360
EQPREVVVPR EVVREVSREL PRDVSRDSSK AVKDTAKTRQ EKPEELPTIK TKKSPTCSES  420
GDSTPFMLSP RRLMAALSSP SPEKKFGKLV HSSSTRSSTP STSAASTQCE DSLPNINIRL  480
AKQATCLSNF RLCGNANPHA TDSRPDSPEH PLAAAAQPAS GAVPQSPNTR GHQGGPYWPR  540
WRSGRKPRTS SEGKEGPEPP TPPRGPMTKP VTVAKPDPPL KKSFEFDMNV SGVNSAMATP  600
FLQTENNSPS SSESSSAAVS SGKKPASISL SGTSDASDGG NGASSTASSS SEVQNNVSVK  660
EVITQQLPSP SSSEGRPSLN IDTASLPRVS ISEAISDVRE TVKTTRPDSP ESPMKPNPPS  720
SPVRTQLSSS PSFNKRIEDA RARARSLVSK EIRSGESRSS KDLLKENDRV KTSSGSMRSG  780
STRTPNNKNG TTGAGSKTLS GTFNRSPPRI NSIMWEDAPL TPTKKEFVNR DDRPLTAGRT  840
NLDWEKTLQE AASLSLPPPD FGQILQECGQ CGRTFKPDSL KVHMRGCHAL RRSKDFQPFN  900
GTSVAIRTRL Q*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP64524